Short Description
The Core Facility Molecular Biodiversity Lab processes RNA, DNA and hormone samples using molecular biological and analytical techniques, which allow describing biodiversity on a molecular level. We apply techniques of DNA-Barcoding and Metabarcoding as well as genomical and population genetical techniques.
This includes the following work steps and notable equipment:
- DNA isolation ( including incubators),
- PCR (thermocyclers and UV-workstation),
- gel electrophoresis and gel documentation, DNA purification, next generation sequencing (Covaris Ultrasonicator, Magnetic Bead Purification),
-Nanopore Sequenzierung
- hormone extraction (orbital shaker, vakuum centrifuge).
In addition, a reverse osmosis ultrapure water system and various centrifuges (including a refrigerated centrifuge) are available. The Core Facility Molecular Biodiversity Lab is partner of ABOL (Austrian Barcode of Life).
Contact Person
Univ.- Prof. Jan C. Habel
Research Services
DNA-Isolation, single gene PCR (including DNA-Barcoding);
Methods & Expertise for Research Infrastructure
Expertises include isolation of RNA & DNA from various types of samples, PCR amplification of single genes (including DNA barcoding), fragment length analysis (microsatellite genotyping, AFLPs, RADseq), and next generation sequencing, including genome sequencing, transcriptome sequencing, and targeted gene enrichment as well as genomic and sequence based numerical analystics. Other expertise includes the extraction of steroid hormones from blood plasma and feathers and the quantification of hormone titers using enzyme immunoassays.
Haus der Natur Salzburg
2020
Anja C. Hörger und Stephanie Socher
FWF
https://www.plus.ac.at/environment-and-biodiversity-en/research-2/research-fields-of-botany/doetterl/projects/amorphophallus-titanum/?lang=en
Populationsgenetik der Gelbbauchunke Bombina variegata
2022/2023
Eberle, Link, Ramsimmer, Maletzky
ENNACON environment nature consulting KG
na
DNA Barcoding Zuckmücken / Stechmücken
2022/2023
Sommer, Eberle, Petermann
na
2023
Meusburger T, Lettner H, Hubmer AK, Hörger AC, Friedl G, Tippelt G, Marbach M
J Environ Radioact, 259-260:107102.
https://www.sciencedirect.com/science/article/pii/S0265931X22002934
doi: 10.1016/j.jenvrad.2022.107102.
Variation in scent amount but not in composition correlates with pollinator visits within populations of deceptive Arum maculatum L. (Araceae).
2023
Gfrerer E*, Laina D*, Gibernau M, Comes HP, Hörger AC, Dötterl S
Front Plant Sci, 13:1046532.
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9869488/
doi: 10.3389/fpls.2022.1046532.
Local insect availability partly explains geographical differences in floral visitor assemblages of Arum maculatum L. (Araceae).
2022
Laina D, Gfrerer E, Scheurecker V, Fuchs R, Schleifer M, Zittra C, Wagner R, Gibernau M, Comes HP, Hörger AC*, Dötterl S*
Front Plant Sci, 13:838391.
https://www.frontiersin.org/articles/10.3389/fpls.2022.838391/full
doi:10.3389/fpls.2022.838391.