Short Description
A precise molecular understanding of the heterogeneity of tissues of higher organisms is critical to answering a number of key biomedical questions. The GeoMx Digital Spatial Profiler (DSP) station allows detailed molecular analysis of defined areas within complex, heterogeneous tissue samples at both protein and mRNA level in high-plex formats. The technology provides a spatial-molecular picture of complex biological samples by generating total transcriptomes and profiling data for hundreds of validated protein analytes from so-called "regions of interest" of selected tissue sections.This enables researchers to investigate the multiple cellular and molecular interactions, for example between cancer cells, cells of the microenvironment and therapeutically relevant cells of the immune system, with unprecedented precision. The GeoMX DSP Station thus represents a robust and flexible technology platform that enormously accelerates the path from the discovery of biomedically relevant processes to translational research questions.
Contact Person
Univ.- Prof. Dr. Fritz Aberger
Research Services
spatially highly resolved mRNA and protein profiles from defined regions of complex human and murine tissue sections
Methods & Expertise for Research Infrastructure
The Nanostring GeoMX DSP technology extends the methodology of genomics and proteomics to 3D biology. The GeoMX technology allows the creation of spatial expression profiles within histological section preparations of complex human and murine tissues with unprecedented spatial resolution, precision and depth.
Allocation to research infrastructure
PLUS Focus ACBN
University Institute of Pathology of the Salzburg State Hospitals
Salzburg Cancer Research Institute (SCRI)
Department of Internal Medicine III, Oncology Center, University Hospital Salzburg
Department of Surgery, University Hospital Salzburg
Paracelsus Medical University (PMU)
BIOMED Center Salzburg
2023-2026
Fritz Aberger, Claudio Brancolini, Christian Weichenberger, Fulvia Fellugia
EU
www.plus.ac.at/aberger
Cancer Cluster Salzburg - Smart Specialization Center für Tumor-Microenvironment Communication
2018-2024
Richard Greil, Fritz Aberger
Land Salzburg
www.cancercluster-salzburg.at
Biomed Center Salzburg
2020-2024
Fritz Aberger
Land Salzburg
TBA
Hijacking the immune system: How Helicobacter pylori compromises anti-cancer immunity
2024-2026
Theresa Neuper
Universität Salzburg