Innsbruck Medical University
Innsbruck | Website
Core facility (CF)
Short Description
NGS corefacility.
Mainly consists of a library prep workflow and Ion torrent sequencers.
Please refer to our homepage for further info. http://ngsfacility.i-med.ac.at/
Contact Person
Anne Krogsdam
Research Services
NGS project consultations, QC (Qubit and bioanalyzer), Library preparations, Sequencing, data delivery.
Methods & Expertise for Research Infrastructure
NGS library preparation and sequencing. Particularly expertise in RNA-seq / transcriptomes.
Equipment
Anne Krogsdam
I-Med GenomeSeq Core und Sektion Bioinformatik
0512 9003 71405
Anne.Krogsdam@i-med.ac.at
http://ngsfacility.i-med.ac.at/
I-Med GenomeSeq Core und Sektion Bioinformatik
0512 9003 71405
Anne.Krogsdam@i-med.ac.at
http://ngsfacility.i-med.ac.at/
Interaction with the Sequencing facility is open for all, either on a collaborative basis or purely as pay-for-service.
Nuclear receptor NR2F6 inhibition potentiates responses to PD-L1/PD-1 cancer immune checkpoint blockade.
Klepsch V, Hermann-Kleiter N, Do-Dinh P, Jakic B, Offermann A, Efremova M, Sopper S, Rieder D, Krogsdam A, Gamerith G, Perner S, Tzankov A, Trajanoski Z, Wolf D, Baier G.
Nat Commun. 2018 Apr 18;9(1):1538. doi: 10.1038/s41467-018-04004-2.
Targeting immune checkpoints potentiates immunoediting and changes the dynamics of tumor evolution.
Efremova M, Rieder D, Klepsch V, Charoentong P, Finotello F, Hackl H, Hermann-Kleiter N, Löwer M, Baier G, Krogsdam A, Trajanoski Z.
Nat Commun. 2018 Jan 2;9(1):32. doi: 10.1038/s41467-017-02424-0.
Impact of the Chromatin Remodeling Factor CHD1 on Gut Microbiome Composition of Drosophila melanogaster.
Sebald J, Willi M, Schoberleitner I, Krogsdam A, Orth-Höller D, Trajanoski Z, Lusser A.
PLoS One. 2016 Apr 19;11(4):e0153476. doi: 10.1371/journal.pone.0153476. eCollection 2016.
Changes in the miRNA-mRNA Regulatory Network Precede Motor Symptoms in a Mouse Model of Multiple System Atrophy: Clinical Implications.
Schafferer S, Khurana R, Refolo V, Venezia S, Sturm E, Piatti P, Hechenberger C, Hackl H, Kessler R, Willi M, Gstir R, Krogsdam A, Lusser A, Poewe W, Wenning GK, Hüttenhofer A, Stefanova N.
PLoS One. 2016 Mar 10;11(3):e0150705. doi: 10.1371/journal.pone.0150705. eCollection 2016.
Klepsch V, Hermann-Kleiter N, Do-Dinh P, Jakic B, Offermann A, Efremova M, Sopper S, Rieder D, Krogsdam A, Gamerith G, Perner S, Tzankov A, Trajanoski Z, Wolf D, Baier G.
Nat Commun. 2018 Apr 18;9(1):1538. doi: 10.1038/s41467-018-04004-2.
Targeting immune checkpoints potentiates immunoediting and changes the dynamics of tumor evolution.
Efremova M, Rieder D, Klepsch V, Charoentong P, Finotello F, Hackl H, Hermann-Kleiter N, Löwer M, Baier G, Krogsdam A, Trajanoski Z.
Nat Commun. 2018 Jan 2;9(1):32. doi: 10.1038/s41467-017-02424-0.
Impact of the Chromatin Remodeling Factor CHD1 on Gut Microbiome Composition of Drosophila melanogaster.
Sebald J, Willi M, Schoberleitner I, Krogsdam A, Orth-Höller D, Trajanoski Z, Lusser A.
PLoS One. 2016 Apr 19;11(4):e0153476. doi: 10.1371/journal.pone.0153476. eCollection 2016.
Changes in the miRNA-mRNA Regulatory Network Precede Motor Symptoms in a Mouse Model of Multiple System Atrophy: Clinical Implications.
Schafferer S, Khurana R, Refolo V, Venezia S, Sturm E, Piatti P, Hechenberger C, Hackl H, Kessler R, Willi M, Gstir R, Krogsdam A, Lusser A, Poewe W, Wenning GK, Hüttenhofer A, Stefanova N.
PLoS One. 2016 Mar 10;11(3):e0150705. doi: 10.1371/journal.pone.0150705. eCollection 2016.